Prediction of PWMs for multiple proteins

DNA binding site predictor for Cys₂His₂ Zinc Finger Proteins

Predict PWMs for multiple proteins

1. Select the FASTA file containing C₂H₂-ZF protein sequences:

2. Select maximum linker size: 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20

3. Select prediction method: linear SVM polynomial SVM

Please note that the total number of input protein sequences is limited. If you need to process more than 20 C2H2-ZF protein sequences, please use a standalone version of our PWM predictor, which is available in Downloads.

This research has been supported by NSF ABI-1458457, CCF-0542187 and NIH GM076275