Here, you can enter your Cys₂His₂ zinc finger protein, and for each domain found in it, we will find the most similar domains that are found in our B1H selections, and use them to predict its binding specificity.

Paste your C₂H₂ protein sequence:

MKMASQRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMV LSACSPYFNTLFVSHPEKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQER LTAFLRVAESLRIKGLTEVNDDKPSPAAAAAGAGATGSESTATTPQLQRI QPYLVPQRNRSQAGGLLASAANAGNTPTLPVQPSLLSSALMPKRKRGRPR KLSGSSNGTGNDYDDFDRENMMNDSSDLGNGKMCNESYSGNDDGSDDNQP NAGHTDDLNESRDSLPSKRSKNSKDHRVVSHHEDNSTSDGNDSDGEGLDT SYMEPQLMLDEYDEPVEFKYNPLTDNSSPTQDHTDGSHLNEQARQQAFLI AAQRKHQVETAAAAAASGIKLNIIGMAAGGAQVKSMVSIPKLTPIGKVNA ASTPLVSPAGSFSTATVKPRVQKRPKLGKQNGDVKPAVFSSQEYLDIYNS NDGFKLKAAGLSGSTPNLSAGLGTPSVKTKLNLSSNVGEGEAEGSVRDYC TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRK DNMTAHVKIIHKIENPSTALATVAAANLAGQPLGVSGASTPPPPDLSGQN SNQSLPATSNALSTSSSSSTSSSSGSLGPLTTSAPPAPAAAAQ

Choose the dataset: F2 F3 F2+F3 union F2+F3 intersection